Information for Lmscaffold113.153

· Gene Ontology:


no information


· KEGG information:


no information


· Enzyme Commission number (EC):


no information


· Gene family:


B3/PF02362; AUX_IAA/PF02309; Auxin_resp/PF06507


· Interpro information:


Lmscaffold113.153


· Expression data: (root) (FPKM)


2500m3000m3500m4000m
26.114143.222326.67837.6496


· Simple Sequence Repeat (SSR) data:


SSR nr.SSR typeSSRsizestartend


· Protein sequence: (790 aa)


>Lmscaffold113.153
MEFDLNTEIAEVEEKENDGGVGIEKGALGISPSSSSSCTSGSSSSSSSTASASSIYSELWHACAGPLTSLPKKGNVVVYLPQGHLEQDAMVSYSSPLEIPKFDLNPHIICRVVNVQLLANKETDEVYTQVTLLPLQEFSMLNTEGKEVSDLGGDEERNRSSSVKRTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFASLDYNQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSLFVSQKNLVSGDAVLFLRGEDGELRLGIRRAARPRNGLPDSIIEKYSSSDILSLVANAVSTKSMFHVFYSPRATHADFVIPYEKYITSIRNPICIGTRFRMQFEMEDSPERRCAGVVAGICDLDPCRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPPLSIQSSPRPKRPWAGLLDTPPGNPIPERGGFMDFEESVRPSQVLQGQENIGSASSSQGFDVMNRRILDFAMQSHANPVLLSSRVKNRFGEFVDASASALDPACSRVMDLDRYPRVLQGQEICSLKSFPQFAGFNPAAASGKPSIGYTDPFAYQTNKSSFYPLASQGIRSTHIPYQNPYNAEGKSLACPSRPINFGEDTRKFDAVNEGGLPKNVTSDLPFKFGMPGKQKGDSFSTNGSSGCKLFGFSLPVETPASNPQNSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLIELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNKSCLEQAALMIEASKSSSVTQPDTSPTVTWV


· CDS sequence: (2373 bp)


>Lmscaffold113.153
ATGGAATTTGACTTGAATACTGAAATTGCGGAGGTGGAAGAGAAGGAGAATGATGGAGGAGTGGGGATTGAGAAGGGTGCGCTTGGAATTTCACCATCATCTTCTTCTTCATGTACTTCTGGATCATCATCATCTTCATCTTCTACAGCTTCTGCATCTTCCATATACTCTGAGTTGTGGCATGCTTGTGCTGGTCCTCTCACTTCTCTTCCCAAGAAAGGCAATGTAGTTGTGTATCTTCCACAAGGTCATTTGGAGCAAGATGCTATGGTTTCATATTCATCTCCTCTTGAAATCCCCAAATTTGACCTCAACCCCCATATCATCTGCAGGGTCGTTAATGTCCAATTGCTTGCTAATAAGGAAACTGATGAGGTCTATACTCAAGTCACTCTGCTTCCACTGCAAGAGTTTTCAATGCTTAATACGGAGGGGAAAGAGGTCAGTGATTTAGGAGGGGACGAAGAGAGGAACAGAAGCTCATCTGTCAAACGAACACCTCATATGTTCTGCAAAACCTTAACAGCTTCTGACACAAGCACCCATGGAGGCTTCTCCGTACCTAGAAGAGCCGCTGAAGATTGTTTTGCATCTCTTGACTACAATCAACAGAGGCCATCTCAAGAGCTCATTGCAAAAGACCTTCATGGGGTAGAGTGGAAGTTTCGGCATATCTATAGAGGTCAACCAAGGAGGCATCTCCTTACCACTGGTTGGAGTTTATTCGTCAGTCAAAAGAATCTTGTGTCTGGTGATGCAGTTCTCTTTCTGAGAGGCGAAGATGGAGAGCTAAGATTAGGAATTAGAAGAGCGGCACGGCCAAGAAATGGACTTCCAGACTCAATCATTGAGAAGTATTCATCTTCAGACATTTTGTCTCTTGTCGCTAATGCTGTATCTACAAAAAGCATGTTTCATGTCTTTTATAGTCCACGCGCAACGCATGCAGACTTTGTGATTCCTTATGAGAAGTATATCACAAGCATCAGGAATCCCATTTGCATAGGTACAAGGTTCAGAATGCAATTTGAAATGGAGGACTCCCCTGAGAGAAGATGTGCTGGTGTAGTGGCTGGAATCTGTGACTTGGACCCGTGTAGGTGGCCAAACTCTAAATGGAGGTGCTTGTTGGTGCGATGGGATGAGTCCTTTGTGAGTGATCACCAAGAAAGAGTTTCCCCTTGGGAGATTGATCCCTCGGTTTCTCTCCCACCCTTAAGCATTCAGTCATCTCCAAGGCCTAAAAGGCCATGGGCAGGTCTACTGGATACTCCACCTGGAAACCCCATACCCGAAAGGGGAGGTTTCATGGACTTTGAGGAGTCGGTTAGACCCTCTCAGGTCTTGCAAGGTCAAGAAAATATAGGTTCTGCATCATCCTCACAGGGATTTGATGTTATGAACCGCCGGATCCTGGATTTTGCGATGCAGTCTCATGCAAATCCAGTTCTTTTGTCGAGTAGAGTGAAGAATCGATTTGGTGAGTTTGTAGATGCTAGTGCTTCAGCCCTAGACCCAGCCTGTTCACGGGTTATGGACCTGGATAGATATCCAAGGGTCTTGCAAGGTCAAGAAATTTGCTCACTTAAATCATTCCCGCAATTTGCTGGTTTCAATCCAGCTGCTGCTTCAGGGAAACCAAGTATTGGATACACTGATCCCTTTGCTTATCAAACCAACAAGTCAAGTTTCTATCCACTAGCTTCACAAGGGATTAGGAGCACTCATATTCCATATCAGAATCCATACAATGCGGAAGGCAAATCCTTGGCTTGTCCTTCTCGCCCAATAAACTTTGGTGAAGATACTAGAAAATTTGATGCAGTAAATGAAGGTGGCTTGCCGAAAAATGTTACATCTGATTTGCCATTCAAGTTTGGTATGCCGGGAAAACAGAAAGGAGATAGCTTTAGTACAAATGGTTCATCAGGATGTAAACTTTTCGGATTCTCCTTACCTGTGGAGACACCTGCATCTAACCCACAAAACTCGAGCAAAAGGATATGCACAAAAGTTCACAAGCAAGGAAGCCAGGTGGGGAGGGCTATTGATTTGTCCCGGCTAAACGGGTATGATGATCTCCTTATTGAGCTAGAACGCTTGTTCAACATGGAAGGGCTTCTCAGGGATCCTGAAAAAGGATGGCGGATCTTATACACAGATAGTGAAAATGATATGATGGTTGTTGGCGATGATCCATGGCATGATTTCTGCAATGTGGTGTGGAAGATACATTTGTACACCAAAGAGGAAGTGGAGAATGCAAATGATGATAACAAAAGTTGTTTAGAACAAGCTGCTCTCATGATCGAAGCATCAAAATCATCTTCTGTGACCCAGCCTGATACCTCTCCAACGGTCACTTGGGTTTGA


· Genomic location:


scaffold113:859421:863093:+