Information for Lmscaffold18.172

· Gene Ontology:


GO:0003677


· KEGG information:


K14486: K14486, ARF; auxin response factor


· Enzyme Commission number (EC):


no information


· Gene family:


B3/PF02362; Auxin_resp/PF06507


· Interpro information:


Lmscaffold18.172


· Expression data: (root) (FPKM)


2500m3000m3500m4000m
70.773876.84466.499357.8053


· Simple Sequence Repeat (SSR) data:


SSR nr.SSR typeSSRsizestartend


· Protein sequence: (601 aa)


>Lmscaffold18.172
MGGLIDLNVMETEEEETQTPSSGSVSPTSSSSASASVVSSGSGGVCLELWHACAGPLISLPKRGSLVLYFPQGHLDEAPDFSAAIYGLPPHVFCRILDVKLHAETSTDEVYAQVSLLPESEDVERKVREGILDVDGGEEDYEVLKRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNTKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGGSAFSTQYTQNMNHNNFAEVAHAISTHSVFNIYYNPKASWSNFIIPARKFLKIVDYPYCIGMRFKVRVESEDATERRSPGIITGISDLDPIRWPGSKWRCLLVRWDDIEGNGNPQRVSPWEIEPSGSISNSGSFITSGPKRSRIGFSSGKPDIPVSEGNRTTDFEESLRFQRVLQGQEIFPGFIDTSLDVGAGARRGRFKGTDFGDTYGFHKVFQGQETVPAYSITDNRQHGLSLRNIWCGPFQNFSTRILPPSVSSSPSSVLITNPSSPNGRPEDHHGGAGRCRLFGFPLTDETTVVASATVVPCVEGNSMKGVSAVQSNHHHAQGRDIYAMRDMLLDIAL


· CDS sequence: (1806 bp)


>Lmscaffold18.172
ATGGGTGGCTTAATCGATCTGAACGTGATGGAGACGGAAGAGGAAGAAACGCAAACGCCATCTTCTGGGTCGGTGTCGCCTACTTCGTCGTCTTCAGCTTCTGCGTCTGTGGTGTCTTCAGGCTCAGGTGGTGTTTGTCTGGAGTTGTGGCATGCTTGTGCTGGACCCCTCATCTCTCTTCCTAAAAGAGGAAGCCTTGTGTTGTATTTCCCTCAGGGACATTTGGATGAAGCCCCCGATTTCTCCGCCGCGATTTACGGGCTCCCTCCTCACGTGTTCTGTCGTATTCTCGATGTCAAGCTTCACGCAGAGACGTCTACAGATGAAGTTTATGCTCAAGTATCTCTTCTTCCTGAATCCGAGGACGTTGAACGAAAGGTGCGTGAGGGTATTTTAGATGTTGATGGTGGAGAGGAAGATTATGAAGTGCTTAAGAGGTCAAATACTCCTCACATGTTCTGCAAAACGCTAACTGCTTCTGACACAAGCACCCATGGAGGATTTTCTGTTCCTCGTCGAGCTGCCGAGGATTGCTTCCCTCCTCTGGACTATAGCCAGCCCCGGCCTTCTCAAGAGCTTCTTGCCAGGGATCTTCATGGCTTGGAGTGGCGATTTCGCCACATTTATCGAGGGCAACCTAGGAGGCATCTTCTTACTACTGGGTGGAGTGCGTTTGTGAACACGAAGAAGCTTGTCTCCGGAGATGCTGTGCTTTTCCTCAGAGGGGATGATGGTAAATTGCGACTAGGAGTTAGAAGAGCTTCCCAAATCGAAGGGGGTTCTGCTTTCTCAACTCAGTATACTCAGAATATGAACCACAACAATTTTGCTGAGGTTGCTCATGCCATATCGACACATAGCGTTTTCAACATTTACTACAACCCAAAGGCAAGCTGGTCAAACTTCATAATCCCTGCACGGAAGTTCTTGAAAATTGTTGACTATCCATATTGTATCGGTATGAGATTCAAAGTAAGGGTTGAGTCTGAAGATGCTACCGAGAGAAGATCCCCTGGCATTATAACTGGAATCAGCGACTTGGATCCTATCAGGTGGCCTGGTTCAAAATGGAGATGCCTTTTGGTGAGGTGGGACGACATTGAGGGAAATGGGAATCCACAACGGGTCTCACCATGGGAGATTGAACCCTCTGGTTCAATCTCAAATTCAGGTAGCTTCATAACATCTGGTCCCAAGAGAAGCAGGATTGGGTTTTCCTCAGGAAAGCCTGACATTCCTGTCTCAGAGGGGAATCGCACCACAGACTTTGAGGAATCTTTGAGATTCCAGAGGGTCTTGCAAGGTCAAGAAATTTTTCCGGGTTTCATCGACACTTCTTTGGATGTTGGTGCCGGTGCCAGGAGAGGCCGCTTCAAAGGAACGGACTTTGGTGATACTTATGGATTCCATAAGGTCTTTCAAGGTCAAGAAACAGTTCCTGCCTACTCAATAACCGATAATCGACAGCACGGGTTGAGCCTGAGGAACATTTGGTGTGGGCCATTCCAGAACTTTAGTACTCGTATCCTACCCCCATCTGTGTCATCATCACCCTCTTCCGTCTTGATAACCAACCCAAGCAGTCCTAATGGGCGTCCAGAAGATCATCACGGAGGTGCAGGCAGGTGCAGACTGTTTGGTTTCCCACTAACCGACGAGACCACAGTAGTTGCATCTGCGACGGTTGTTCCATGTGTTGAAGGAAACTCCATGAAAGGTGTTTCAGCTGTTCAAAGCAATCATCATCATGCACAAGGAAGAGACATCTACGCTATGAGAGACATGTTGCTAGACATCGCTCTCTAG


· Genomic location:


scaffold18:2472477:2475733:-