Information for Lmscaffold356.450
· Gene Ontology:
no information
· KEGG information:
K14431: TGA; transcription factor TGA
· Enzyme Commission number (EC):
no information
· Gene family:
bZIP_1/PF00170; DOG1/PF14144; bZIP_2/PF07716
· Interpro information:
· Expression data: (root) (FPKM)
| 2500m | 3000m | 3500m | 4000m |
| 15.6955 | 23.1072 | 6.63934 | 9.57943 |
· Simple Sequence Repeat (SSR) data:
| SSR nr. | SSR type | SSR | size | start | end |
| | | | | |
· Protein sequence: (376 aa)
>Lmscaffold356.450
MMSSSSPTQLASLRDMGIYEPFQQIVGWGNVFKSDINDHSPSTATSSIIQVDARIDDHNNLKMNYDSSHNQIEAEPSSNDHQDDDGRIHDKMKRRLAQNREAARKSRLRKKAYVQQLEESRLKLSQLEQELEKAKQQGLCIGNSSDSRYLGSCGRMNRGIFAFEMEYTHWLEEQSRRVTEIRTAIHSHISEIELNMLVESCLSHYAKLFRMKSDAAKADVFYLISGMWRTSTERFFQWIGGFRPSELLNVVMPYLQPLTDQQILEVRNLQQSSQQAEDALSQGIDKLQQSLAENIVIDAVIDSMDYPPHMAAAIENLQALEGFVNQADHLRQQTLQQMAKILTTRQSARGLLALGEYLHRLRALSSLWAARPQEAN
· CDS sequence: (282 bp)
>Lmscaffold356.450
ATGTCGGGAATAAGATCACGTTCGAGAAAATCATCAGGAACTTCAAGGATCTCAGAAGATCAAATCAATGATCTCATTATCAAGTTGCAGCAGCTTCTTCCTGAGCTTAGAGACAGTCGTCGTTCCGACAAGGTTTCAGCAGCAAGAGTACTACAAGATACGTGCAACTACATAAGGAATCTGCATAGAGAAGTTGATGATCTAAGTGAGAGACTTTCTGAGTTACTTGCAAACACAGACACTGCTCAAGCTGCTTTAATCAGAAGCTTACTTACTCAATAA
· Genomic location:
scaffold356:3164000:3165664:+